MLOC_6706 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.0694 | 6.08734 | 6.56101 | 7.61594 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.85022 | 5.45631 | 10.4845 | 5.88982 |
| INF1 | Young developing inflorescences (5mm) | 9.20509 | 10.9765 | 13.1284 | 10.7147 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.571 | 11.5297 | 12.6585 | 14.767 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 24.5087 | 7.73531 | 11.6023 | 11.6693 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.05794 | 13.3893 | 18.6539 | 36.2728 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.7214 | 12.1485 | 12.0701 | 13.7196 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.15142 | 3.65646 | 2.89654 | 10.0535 |
CDS Structure of MLOC_6706
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6706.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g04000.1 |
-1 |
4e-93 |
278 |
143/158 (91%) |
13106.m00346 protein peptidyl-prolyl cis-trans isomerase, putative, expressed |
| TAIR PP10 |
AT1G01940.1 |
-1 |
3e-89 |
267 |
135/159 (85%) |
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr1:323082-324719 FORWARD LENGTH=160 |
