MLOC_67057 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains460.884357.014362.905457.12
LEAShoots from the seedlings (10 cm shoot stage)241.35165.888193.627192.28
INF1Young developing inflorescences (5mm)613.285649.205631.876600.905
INF2Developing inflorescences (1-1.5 cm)462.011414.334493.86565.373
ROORoots from the seedlings (10 cm shoot stage)284.42335.95386.502511.419
NODDeveloping tillers at six leaf stage, 3rd internode73.312482.8183164.305361.846
CAR5Developing grain, bracts removed (5 DPA)198.014213.473209.106247.736
CAR15Developing grain, bracts removed (15 DPA)94.9296101.63394.0776259.797



CDS Structure of MLOC_67057






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67057.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357558NoneNoneNoneNone
MLOC_67057.1CUST_5437_PI427708080AvailableAvailablecontig_52499 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g38260.1 +3 8e-87 265 184/187 (98%) 13103.m04154 protein 60S ribosomal protein L19-3, putative, expressed
TAIR PP10 AT3G16780.1 +3 1e-77 241 161/185 (87%) Ribosomal protein L19e family protein | chr3:5708982-5710249 FORWARD LENGTH=209