MLOC_67041 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.2034811.900512.05412.3852
LEAShoots from the seedlings (10 cm shoot stage)11.252413.718411.588811.3297
INF1Young developing inflorescences (5mm)12.57713.344314.245111.7289
INF2Developing inflorescences (1-1.5 cm)15.103616.320114.462717.5952
ROORoots from the seedlings (10 cm shoot stage)9.1337613.86811.897117.8402
NODDeveloping tillers at six leaf stage, 3rd internode13.14412.496612.614745.0995
CAR5Developing grain, bracts removed (5 DPA)9.427199.777619.511419.88128
CAR15Developing grain, bracts removed (15 DPA)3.434193.946364.546178.99679



CDS Structure of MLOC_67041






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67041.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370578NoneNoneNoneNone
MLOC_67041.1CUST_5434_PI427708080AvailableAvailablecontig_52474 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g35710.1 -3 0.0 555 391/566 (69%) 13109.m03497 protein UBX domain-containing protein, putative, expressed
TAIR PP10 AT4G11740.1 -3 1e-85 285 257/587 (44%) | Symbols: SAY1 | Ubiquitin-like superfamily protein | chr4:7071955-7075256 FORWARD LENGTH=564