MLOC_67028 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4700490.3088120.2550830.31411
LEAShoots from the seedlings (10 cm shoot stage)1.056110.5738720.5945260.569502
INF1Young developing inflorescences (5mm)0.22618700.07168750.10627
INF2Developing inflorescences (1-1.5 cm)000.1322420.182655
ROORoots from the seedlings (10 cm shoot stage)4.270213.438020.1944063.18934
NODDeveloping tillers at six leaf stage, 3rd internode6.744180.4342540.9547940.996858
CAR5Developing grain, bracts removed (5 DPA)1.477780.597860.9457590.983552
CAR15Developing grain, bracts removed (15 DPA)0.803591.185520.8199882.45122



CDS Structure of MLOC_67028






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67028.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67028.1CUST_15055_PI427708080AvailableAvailablecontig_52451 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g60570.1 +3 8e-30 112 91/143 (64%) 13103.m06648 protein ZOS3-22 - C2H2 zinc finger protein, expressed
TAIR PP10 AT3G46070.1 +3 3e-17 77 49/110 (45%) C2H2-type zinc finger family protein | chr3:16920445-16920957 REVERSE LENGTH=170