MLOC_67027 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1250550.068394600.100888
LEAShoots from the seedlings (10 cm shoot stage)0.1730920.2610520.5005710.220629
INF1Young developing inflorescences (5mm)0.0297170.06676450.1127390.0603378
INF2Developing inflorescences (1-1.5 cm)0.1100050.1630990.1436620.141834
ROORoots from the seedlings (10 cm shoot stage)0.1490170.2112660.1023520.199202
NODDeveloping tillers at six leaf stage, 3rd internode0.2137040.1774920.03985080.362385
CAR5Developing grain, bracts removed (5 DPA)0.4262410.2662750.2954850.286015
CAR15Developing grain, bracts removed (15 DPA)000.0459170.0560119



CDS Structure of MLOC_67027






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67027.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67027.1CUST_9017_PI427708083AvailableAvailablecontig_52444 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g38810.1 -1 4e-37 147 75/106 (71%) 13107.m04016 protein lectin receptor-type protein kinase, putative, expressed
TAIR PP10 AT3G53810.1 -1 1e-15 81 49/112 (44%) Concanavalin A-like lectin protein kinase family protein | chr3:19933153-19935186 REVERSE LENGTH=677