MLOC_67026 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.06999570.061750800.0853474
LEAShoots from the seedlings (10 cm shoot stage)000.1097740.102743
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.26174300.1724050.113285
NODDeveloping tillers at six leaf stage, 3rd internode0.3093870.064456900.221978
CAR5Developing grain, bracts removed (5 DPA)0.062095200.06213220.116813
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_67026






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67026.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67026.1CUST_9016_PI427708083AvailableAvailablecontig_52444 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g38810.1 -2 2e-131 391 194/253 (77%) 13107.m04016 protein lectin receptor-type protein kinase, putative, expressed
TAIR PP10 AT3G53810.1 -2 9e-92 288 146/250 (58%) Concanavalin A-like lectin protein kinase family protein | chr3:19933153-19935186 REVERSE LENGTH=677