MLOC_67009 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains620.391537.287528.582589.257
LEAShoots from the seedlings (10 cm shoot stage)262.253227.914204.608199.831
INF1Young developing inflorescences (5mm)255.015277.575254.978232.41
INF2Developing inflorescences (1-1.5 cm)174.686197.784197.034220.583
ROORoots from the seedlings (10 cm shoot stage)675.324493.764418.465630.191
NODDeveloping tillers at six leaf stage, 3rd internode179.777156.23999.339507.963
CAR5Developing grain, bracts removed (5 DPA)566.271560.811550.994584.654
CAR15Developing grain, bracts removed (15 DPA)477.229468.819372.4861077.29



CDS Structure of MLOC_67009






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67009.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251528.1NoneNoneNoneNone
MLOC_67009.1CUST_5429_PI427708080AvailableAvailablecontig_52414 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g45710.1 -2 0.0 663 364/401 (91%) 13106.m04819 protein phosphoglycerate kinase protein, putative, expressed
TAIR PP10 AT1G79550.2 -2 0.0 638 347/401 (87%) | Symbols: PGK | phosphoglycerate kinase | chr1:29924347-29926295 REVERSE LENGTH=401