MLOC_66958 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.190250.5265130.6814730.6928
LEAShoots from the seedlings (10 cm shoot stage)1.888380.6731881.122320.943506
INF1Young developing inflorescences (5mm)0.1708280.4078720.3399370.276928
INF2Developing inflorescences (1-1.5 cm)0.2538830.3768140.3294990.376198
ROORoots from the seedlings (10 cm shoot stage)2.652021.645191.61011.80902
NODDeveloping tillers at six leaf stage, 3rd internode3.624686.762092.0858813.9631
CAR5Developing grain, bracts removed (5 DPA)1.820871.505791.262691.54963
CAR15Developing grain, bracts removed (15 DPA)3.245892.348621.100485.95931



CDS Structure of MLOC_66958






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66958.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376747NoneNoneNoneNone
MLOC_66958.1CUST_5424_PI427708080AvailableAvailablecontig_52341 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g43590.1 -3 5e-91 285 179/315 (57%) 13105.m04594 protein serpin domain containing protein, putative
TAIR PP10 AT1G47710.1 -3 4e-53 187 129/373 (35%) Serine protease inhibitor (SERPIN) family protein | chr1:17558271-17560061 FORWARD LENGTH=391