MLOC_6694 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 17.9315 | 15.5243 | 14.5828 | 17.8391 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.9371 | 12.4053 | 11.2965 | 10.7474 |
| INF1 | Young developing inflorescences (5mm) | 26.5162 | 26.1422 | 26.2031 | 23.6924 |
| INF2 | Developing inflorescences (1-1.5 cm) | 28.9934 | 20.591 | 24.174 | 28.4331 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.293 | 14.4111 | 16.3509 | 18.7135 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.99582 | 9.39425 | 19.755 | 39.0861 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.9388 | 13.5866 | 12.4664 | 13.7912 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.9683 | 9.0391 | 7.38864 | 19.4539 |
CDS Structure of MLOC_6694
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6694.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g01054.2 |
-1 |
8e-45 |
170 |
81/152 (53%) |
13108.m00006 protein retrotransposon protein, putative, unclassified, expressed |
| TAIR PP10 |
AT5G08230.1 |
-1 |
6e-25 |
108 |
77/229 (34%) |
Tudor/PWWP/MBT domain-containing protein | chr5:2643846-2649788 REVERSE LENGTH=1445 |
