MLOC_66915 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.272422.809762.506911.98985
LEAShoots from the seedlings (10 cm shoot stage)2.805951.912592.237121.82342
INF1Young developing inflorescences (5mm)3.848063.849213.793452.8511
INF2Developing inflorescences (1-1.5 cm)5.157375.782654.894335.19026
ROORoots from the seedlings (10 cm shoot stage)1.887933.009112.211622.9552
NODDeveloping tillers at six leaf stage, 3rd internode2.653053.449442.846099.85552
CAR5Developing grain, bracts removed (5 DPA)3.613743.405993.489212.97957
CAR15Developing grain, bracts removed (15 DPA)0.979660.8170251.165871.96161



CDS Structure of MLOC_66915






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66915.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361491NoneNoneNoneNone
MLOC_66915.2CUST_5419_PI427708080AvailableAvailablecontig_52278 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g53510.1 -3 0.0 633 342/428 (80%) 13103.m05842 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT5G50230.1 -3 4e-125 405 210/405 (52%) Transducin/WD40 repeat-like superfamily protein | chr5:20448632-20450855 REVERSE LENGTH=509