- Predicted Gene MLOC_66855
MLOC_66855 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66855_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_66855_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 11.3073 | 10.3896 | 10.7418 | 10.3058 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.41671 | 1.06908 | 2.99172 | 3.69511 |
INF1 | Young developing inflorescences (5mm) | 19.5462 | 25.2228 | 26.906 | 18.442 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.0092 | 20.1256 | 23.5857 | 21.6651 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.29933 | 5.2387 | 6.85091 | 5.86809 |
NOD | Developing tillers at six leaf stage, 3rd internode | 15.1561 | 9.03964 | 3.87957 | 27.348 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.09712 | 10.0012 | 9.90379 | 8.70182 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.861652 | 0.479933 | 1.00599 | 1.63737 |
CDS Structure of MLOC_66855
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66855.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g08820.1 |
-1 |
9e-51 |
168 |
85/91 (93%) |
13107.m00877 protein C-Myc-binding protein, putative, expressed |
TAIR PP10 |
AT2G14045.2 |
-1 |
4e-40 |
140 |
67/89 (75%) |
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:5907133-5908154 FORWARD LENGTH=122 |