MLOC_66855 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.307310.389610.741810.3058
LEAShoots from the seedlings (10 cm shoot stage)8.416711.069082.991723.69511
INF1Young developing inflorescences (5mm)19.546225.222826.90618.442
INF2Developing inflorescences (1-1.5 cm)18.009220.125623.585721.6651
ROORoots from the seedlings (10 cm shoot stage)3.299335.23876.850915.86809
NODDeveloping tillers at six leaf stage, 3rd internode15.15619.039643.8795727.348
CAR5Developing grain, bracts removed (5 DPA)7.0971210.00129.903798.70182
CAR15Developing grain, bracts removed (15 DPA)0.8616520.4799331.005991.63737



CDS Structure of MLOC_66855






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66855.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374848NoneNoneNoneNone
MLOC_66855.2CUST_5409_PI427708080AvailableAvailablecontig_52188 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g08820.1 -1 9e-51 168 85/91 (93%) 13107.m00877 protein C-Myc-binding protein, putative, expressed
TAIR PP10 AT2G14045.2 -1 4e-40 140 67/89 (75%) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:5907133-5908154 FORWARD LENGTH=122