- Predicted Gene MLOC_66827
MLOC_66827 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66827_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_66827_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.94779 | 12.6417 | 12.0276 | 11.9293 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 37.8892 | 9.67565 | 13.5081 | 18.8025 |
INF1 | Young developing inflorescences (5mm) | 17.6749 | 15.3601 | 17.4185 | 14.6946 |
INF2 | Developing inflorescences (1-1.5 cm) | 25.3167 | 25.2796 | 25.9851 | 28.6257 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.974849 | 3.97295 | 3.81573 | 4.64028 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.983913 | 3.13555 | 0.0729008 | 9.11445 |
CAR5 | Developing grain, bracts removed (5 DPA) | 73.0755 | 78.7778 | 82.1244 | 78.7937 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.14523 | 2.29685 | 3.53384 | 6.91853 |
CDS Structure of MLOC_66827
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66827.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g35400.1 |
+1 |
0.0 |
1148 |
566/662 (85%) |
13111.m03446 protein AMP-binding enzyme, putative, expressed |
TAIR PP10 |
AT1G49430.1 |
+1 |
0.0 |
842 |
403/639 (63%) |
| Symbols: LACS2, LRD2 | long-chain acyl-CoA synthetase 2 | chr1:18291188-18295641 FORWARD LENGTH=665 |