MLOC_66827 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.9477912.641712.027611.9293
LEAShoots from the seedlings (10 cm shoot stage)37.88929.6756513.508118.8025
INF1Young developing inflorescences (5mm)17.674915.360117.418514.6946
INF2Developing inflorescences (1-1.5 cm)25.316725.279625.985128.6257
ROORoots from the seedlings (10 cm shoot stage)0.9748493.972953.815734.64028
NODDeveloping tillers at six leaf stage, 3rd internode0.9839133.135550.07290089.11445
CAR5Developing grain, bracts removed (5 DPA)73.075578.777882.124478.7937
CAR15Developing grain, bracts removed (15 DPA)3.145232.296853.533846.91853



CDS Structure of MLOC_66827






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66827.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356947NoneNoneNoneNone
MLOC_66827.1CUST_5406_PI427708080AvailableAvailablecontig_52159 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g35400.1 +1 0.0 1148 566/662 (85%) 13111.m03446 protein AMP-binding enzyme, putative, expressed
TAIR PP10 AT1G49430.1 +1 0.0 842 403/639 (63%) | Symbols: LACS2, LRD2 | long-chain acyl-CoA synthetase 2 | chr1:18291188-18295641 FORWARD LENGTH=665