- Predicted Gene MLOC_66801
MLOC_66801 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.64945 | 4.21859 | 3.26786 | 4.90158 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.1272 | 0.355775 | 0.993686 | 0.517147 |
INF1 | Young developing inflorescences (5mm) | 0.0642322 | 0.109672 | 0 | 0.0957117 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.525475 | 0.381291 | 0.862734 | 0.626002 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.56652 | 1.74602 | 0.0488045 | 4.14547 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.374416 | 0.390645 | 0.317342 | 0.42045 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_66801
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66801.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g01320.1 |
+2 |
3e-39 |
140 |
63/85 (74%) |
13103.m00048 protein LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
TAIR PP10 |
AT2G45180.1 |
+2 |
1e-35 |
128 |
62/108 (57%) |
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:18626377-18626781 FORWARD LENGTH=134 |