MLOC_66801 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.649454.218593.267864.90158
LEAShoots from the seedlings (10 cm shoot stage)0.12720.3557750.9936860.517147
INF1Young developing inflorescences (5mm)0.06423220.10967200.0957117
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.5254750.3812910.8627340.626002
NODDeveloping tillers at six leaf stage, 3rd internode8.566521.746020.04880454.14547
CAR5Developing grain, bracts removed (5 DPA)0.3744160.3906450.3173420.42045
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_66801






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66801.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66801.1CUST_15024_PI427708080AvailableAvailablecontig_52132 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g01320.1 +2 3e-39 140 63/85 (74%) 13103.m00048 protein LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10 AT2G45180.1 +2 1e-35 128 62/108 (57%) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:18626377-18626781 FORWARD LENGTH=134