MLOC_66786 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.72789.034377.656059.46088
LEAShoots from the seedlings (10 cm shoot stage)6.075044.925256.130154.81265
INF1Young developing inflorescences (5mm)2.633713.75484.43983.51806
INF2Developing inflorescences (1-1.5 cm)2.65492.531043.107663.3075
ROORoots from the seedlings (10 cm shoot stage)42.333419.395823.807726.0173
NODDeveloping tillers at six leaf stage, 3rd internode14.397811.093210.372529.9688
CAR5Developing grain, bracts removed (5 DPA)10.446411.244411.348512.0116
CAR15Developing grain, bracts removed (15 DPA)2.397352.78461.867216.64191



CDS Structure of MLOC_66786






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66786.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66786.5CUST_8986_PI427708083AvailableAvailablecontig_52107 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47620.1 -1 2e-39 125 58/67 (87%) 13107.m05077 protein universal stress protein domain containing protein, putative, expressed
TAIR PP10 AT2G47710.1 -1 1e-27 108 48/64 (75%) Adenine nucleotide alpha hydrolases-like superfamily protein | chr2:19555045-19555956 REVERSE LENGTH=162