MLOC_66784 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.0981311.652411.77999.5355
LEAShoots from the seedlings (10 cm shoot stage)35.772635.593828.720127.0417
INF1Young developing inflorescences (5mm)6.72366.632096.614515.26658
INF2Developing inflorescences (1-1.5 cm)12.29247.3577111.010910.1794
ROORoots from the seedlings (10 cm shoot stage)8.9116217.035512.902616.9841
NODDeveloping tillers at six leaf stage, 3rd internode28.710736.138439.7853112.086
CAR5Developing grain, bracts removed (5 DPA)38.222436.356236.377733.2053
CAR15Developing grain, bracts removed (15 DPA)46.928941.406844.314394.8486



CDS Structure of MLOC_66784






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66784.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371830NoneNoneNoneNone
MLOC_66784.2CUST_5400_PI427708080AvailableAvailablecontig_52104 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g52390.1 -2 0.0 1328 712/793 (90%) 13104.m05371 protein potassium transporter, putative, expressed
TAIR PP10 AT2G35060.1 -2 0.0 1032 561/790 (71%) | Symbols: KUP11 | K+ uptake permease 11 | chr2:14775184-14778184 REVERSE LENGTH=792