MLOC_66756 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains72.484343.26947.584149.7025
LEAShoots from the seedlings (10 cm shoot stage)112.559136.067185.075106.908
INF1Young developing inflorescences (5mm)1.275581.166440.790030.928868
INF2Developing inflorescences (1-1.5 cm)0.868190.706630.7791050.850944
ROORoots from the seedlings (10 cm shoot stage)29.733414.032319.190616.9606
NODDeveloping tillers at six leaf stage, 3rd internode10.101710.387348.141642.2994
CAR5Developing grain, bracts removed (5 DPA)5.372496.741196.632216.00187
CAR15Developing grain, bracts removed (15 DPA)2.815142.398091.907886.00822



CDS Structure of MLOC_66756






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66756.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362069NoneNoneNoneNone
MLOC_66756.1CUST_5398_PI427708080AvailableAvailablecontig_52057 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g01020.1 -3 0.0 542 296/319 (93%) 13107.m00002 protein SOR/SNZ family protein, putative, expressed
TAIR PP10 AT5G01410.1 -3 2e-176 512 275/313 (88%) | Symbols: PDX1, ATPDX1.3, RSR4, PDX1.3, ATPDX1 | Aldolase-type TIM barrel family protein | chr5:172576-173505 REVERSE LENGTH=309