MLOC_6673 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.670421 | 0.734038 | 0.706056 | 0.750449 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.293527 | 0.302972 | 0.158262 | 0.22557 |
| INF1 | Young developing inflorescences (5mm) | 2.57001 | 2.45998 | 2.30941 | 2.10899 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.23324 | 5.97588 | 5.65555 | 6.30036 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.156942 | 0.0881935 | 0.266596 | 0.152007 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.967808 | 0.388767 | 0.370787 | 1.42037 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 16.8638 | 16.8344 | 16.5504 | 16.8584 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.96231 | 1.44363 | 1.86089 | 4.08846 |
CDS Structure of MLOC_6673
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6673.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g08970.1 |
-3 |
0.0 |
929 |
539/657 (82%) |
13101.m00950 protein SSRP1-like FACT complex subunit, putative, expressed |
| TAIR PP10 |
AT3G28730.1 |
-3 |
0.0 |
673 |
327/477 (69%) |
| Symbols: ATHMG, SSRP1, NFD, HMG | high mobility group | chr3:10784954-10788498 FORWARD LENGTH=646 |
