MLOC_66727 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.26536.020396.618965.396
LEAShoots from the seedlings (10 cm shoot stage)8.946747.470267.87116.75268
INF1Young developing inflorescences (5mm)8.423157.746227.688356.1952
INF2Developing inflorescences (1-1.5 cm)7.95769.238717.736088.74295
ROORoots from the seedlings (10 cm shoot stage)4.580347.668464.883327.94322
NODDeveloping tillers at six leaf stage, 3rd internode4.929875.408255.6180117.5418
CAR5Developing grain, bracts removed (5 DPA)8.427257.924568.614087.5153
CAR15Developing grain, bracts removed (15 DPA)6.98876.978816.7869514.3741



CDS Structure of MLOC_66727






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66727.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66727.1CUST_15017_PI427708080AvailableAvailablecontig_52021 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g42490.1 -2 0.0 884 532/928 (57%) 13106.m04445 protein expressed protein
TAIR PP10 AT4G24200.1 -2 4e-24 110 62/181 (34%) Transcription elongation factor (TFIIS) family protein | chr4:12556927-12559929 REVERSE LENGTH=1000