- Predicted Gene MLOC_66727
MLOC_66727 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.2653 | 6.02039 | 6.61896 | 5.396 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.94674 | 7.47026 | 7.8711 | 6.75268 |
| INF1 | Young developing inflorescences (5mm) | 8.42315 | 7.74622 | 7.68835 | 6.1952 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.9576 | 9.23871 | 7.73608 | 8.74295 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.58034 | 7.66846 | 4.88332 | 7.94322 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.92987 | 5.40825 | 5.61801 | 17.5418 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.42725 | 7.92456 | 8.61408 | 7.5153 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.9887 | 6.97881 | 6.78695 | 14.3741 |
CDS Structure of MLOC_66727
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66727.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g42490.1 |
-2 |
0.0 |
884 |
532/928 (57%) |
13106.m04445 protein expressed protein |
| TAIR PP10 |
AT4G24200.1 |
-2 |
4e-24 |
110 |
62/181 (34%) |
Transcription elongation factor (TFIIS) family protein | chr4:12556927-12559929 REVERSE LENGTH=1000 |