MLOC_66722 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.747913.784315.650515.2763
LEAShoots from the seedlings (10 cm shoot stage)40.365611.32049.6823516.8607
INF1Young developing inflorescences (5mm)0.08461340.1520820.1204850.112493
INF2Developing inflorescences (1-1.5 cm)0.1419990.183630.2053280.202957
ROORoots from the seedlings (10 cm shoot stage)16.891911.862910.702914.1059
NODDeveloping tillers at six leaf stage, 3rd internode116.947205.2657.86826435.091
CAR5Developing grain, bracts removed (5 DPA)0.447420.3035380.09226970.283107
CAR15Developing grain, bracts removed (15 DPA)0.03383290.02596500.100586



CDS Structure of MLOC_66722






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66722.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363026NoneNoneNoneNone
MLOC_66722.1CUST_5392_PI427708080AvailableAvailablecontig_52017 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g01590.1 -2 0.0 985 488/678 (72%) 13102.m00080 protein glycosyl hydrolases, putative, expressed
TAIR PP10 AT1G62660.1 -2 0.0 655 333/597 (56%) Glycosyl hydrolases family 32 protein | chr1:23199949-23203515 FORWARD LENGTH=648