- Predicted Gene MLOC_66683
MLOC_66683 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66683_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_66683_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.02422 | 1.11415 | 1.04008 | 1.21128 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.721452 | 0.773994 | 0.265206 | 0.51831 |
INF1 | Young developing inflorescences (5mm) | 2.37891 | 2.68906 | 2.21192 | 2.40286 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.323 | 3.13931 | 2.59246 | 3.50741 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.988629 | 0.925746 | 1.17969 | 1.29986 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.142837 | 0.177172 | 0.336567 | 0.742916 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.22902 | 1.5025 | 1.32707 | 1.58691 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.38576 | 0.395176 | 0.415391 | 1.07716 |
CDS Structure of MLOC_66683
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66683.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g24240.1 |
+2 |
0.0 |
724 |
364/483 (75%) |
13109.m02300 protein pentatricopeptide, putative, expressed |
TAIR PP10 |
AT4G02750.1 |
+2 |
3e-103 |
340 |
183/447 (41%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:1221116-1223461 REVERSE LENGTH=781 |