MLOC_66665 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7081070.421880.2128140.418667
LEAShoots from the seedlings (10 cm shoot stage)0.1434600.04535990.0809724
INF1Young developing inflorescences (5mm)0.2284090.2300081.186360.479846
INF2Developing inflorescences (1-1.5 cm)0.05460480.08942930.1512440.116559
ROORoots from the seedlings (10 cm shoot stage)0.5917090.1837150.4233340.269583
NODDeveloping tillers at six leaf stage, 3rd internode0.1330160.1362940.005956390.238964
CAR5Developing grain, bracts removed (5 DPA)0.02323860.04491480.08698950.0598755
CAR15Developing grain, bracts removed (15 DPA)0.1570290.1308880.08996510.337464



CDS Structure of MLOC_66665






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66665.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377040NoneNoneNoneNone
MLOC_66665.2CUST_5382_PI427708080AvailableAvailablecontig_51923 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g39400.1 +1 1e-119 378 276/466 (59%) 13107.m04081 protein polyol transporter 5, putative, expressed
TAIR PP10 AT3G18830.1 +1 7e-37 145 114/321 (36%) | Symbols: ATPLT5, PMT5, ATPMT5 | polyol/monosaccharide transporter 5 | chr3:6489000-6491209 REVERSE LENGTH=539