- Predicted Gene MLOC_66665
MLOC_66665 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.708107 | 0.42188 | 0.212814 | 0.418667 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.14346 | 0 | 0.0453599 | 0.0809724 |
INF1 | Young developing inflorescences (5mm) | 0.228409 | 0.230008 | 1.18636 | 0.479846 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0546048 | 0.0894293 | 0.151244 | 0.116559 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.591709 | 0.183715 | 0.423334 | 0.269583 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.133016 | 0.136294 | 0.00595639 | 0.238964 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0232386 | 0.0449148 | 0.0869895 | 0.0598755 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.157029 | 0.130888 | 0.0899651 | 0.337464 |
CDS Structure of MLOC_66665
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66665.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g39400.1 |
+1 |
1e-119 |
378 |
276/466 (59%) |
13107.m04081 protein polyol transporter 5, putative, expressed |
TAIR PP10 |
AT3G18830.1 |
+1 |
7e-37 |
145 |
114/321 (36%) |
| Symbols: ATPLT5, PMT5, ATPMT5 | polyol/monosaccharide transporter 5 | chr3:6489000-6491209 REVERSE LENGTH=539 |