MLOC_66661 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.441941.594841.560871.17004
LEAShoots from the seedlings (10 cm shoot stage)3.092371.440592.349651.68149
INF1Young developing inflorescences (5mm)3.217273.840825.433752.50505
INF2Developing inflorescences (1-1.5 cm)6.500475.584333.931794.73569
ROORoots from the seedlings (10 cm shoot stage)1.544362.050622.599841.64324
NODDeveloping tillers at six leaf stage, 3rd internode1.679333.250444.449828.4992
CAR5Developing grain, bracts removed (5 DPA)3.739093.21152.922672.39876
CAR15Developing grain, bracts removed (15 DPA)2.25952.650182.839484.09822



CDS Structure of MLOC_66661






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66661.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66661.5CUST_15007_PI427708080AvailableAvailablecontig_51916 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g61500.1 -1 1e-20 76 32/63 (51%) 13103.m06772 protein uncharacterized Cys-rich domain containing protein, putative
TAIR PP10 AT1G14880.1 -1 7e-20 66 27/55 (49%) | Symbols: PCR1 | PLANT CADMIUM RESISTANCE 1 | chr1:5132791-5133663 REVERSE LENGTH=151