MLOC_66657 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.7199217.014411.57111.1497
LEAShoots from the seedlings (10 cm shoot stage)6.378620.7265431.018892.44314
INF1Young developing inflorescences (5mm)52.370350.240141.928337.4867
INF2Developing inflorescences (1-1.5 cm)41.362248.158434.984843.4533
ROORoots from the seedlings (10 cm shoot stage)1.661537.589266.126447.28018
NODDeveloping tillers at six leaf stage, 3rd internode0.06024830.09995370.04974820.29793
CAR5Developing grain, bracts removed (5 DPA)14.039512.432314.859412.1917
CAR15Developing grain, bracts removed (15 DPA)2.208361.173561.919643.72082



CDS Structure of MLOC_66657






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66657.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66657.2CUST_15005_PI427708080AvailableAvailablecontig_51915 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g15480.1 +1 0.0 1386 680/789 (86%) 13101.m01713 protein EMB3013, putative, expressed
TAIR PP10 AT5G18700.1 +1 0.0 883 460/814 (57%) | Symbols: RUK, EMB3013 | Protein kinase family protein with ARM repeat domain | chr5:6235387-6240733 REVERSE LENGTH=1366