MLOC_66623 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.197948.364928.086427.5286
LEAShoots from the seedlings (10 cm shoot stage)5.129581.121751.166032.15612
INF1Young developing inflorescences (5mm)26.336625.288622.739620.356
INF2Developing inflorescences (1-1.5 cm)24.716529.858624.683827.4166
ROORoots from the seedlings (10 cm shoot stage)11.159615.27679.7427316.3305
NODDeveloping tillers at six leaf stage, 3rd internode0.6761211.492120.5674274.22548
CAR5Developing grain, bracts removed (5 DPA)7.135056.696697.026266.25515
CAR15Developing grain, bracts removed (15 DPA)0.4885270.2507340.9602731.0556



CDS Structure of MLOC_66623






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66623.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66623.1CUST_15000_PI427708080AvailableAvailablecontig_51856 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g21510.3 -3 0.0 927 514/614 (84%) 13103.m02575 protein inactive receptor kinase At2g26730 precursor, putative, expressed
TAIR PP10 AT5G58300.2 -3 0.0 608 351/618 (57%) Leucine-rich repeat protein kinase family protein | chr5:23572821-23574871 FORWARD LENGTH=654