MLOC_66597 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.224833.032132.705531.7029
LEAShoots from the seedlings (10 cm shoot stage)63.4258104.694106.54974.0128
INF1Young developing inflorescences (5mm)0.4540010.320390.2840520.315409
INF2Developing inflorescences (1-1.5 cm)0.2315310.1905880.1973760.247302
ROORoots from the seedlings (10 cm shoot stage)160.525154.731110.429164
NODDeveloping tillers at six leaf stage, 3rd internode266.771251.8462.893819.819
CAR5Developing grain, bracts removed (5 DPA)3.540993.223912.731963.29807
CAR15Developing grain, bracts removed (15 DPA)0.854920.9005390.893442.28945



CDS Structure of MLOC_66597






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66597.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66597.1CUST_8960_PI427708083AvailableAvailablecontig_51821 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g36848.1 -3 0.0 532 317/396 (80%) 13110.m03345 protein cytochrome P450, putative, expressed
TAIR PP10 AT4G36220.1 -3 2e-153 423 245/392 (63%) | Symbols: FAH1, CYP84A1 | ferulic acid 5-hydroxylase 1 | chr4:17137584-17139619 REVERSE LENGTH=520