MLOC_66583 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1978070.17752500.168011
LEAShoots from the seedlings (10 cm shoot stage)0000.0372365
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)000.05959350.0408229
ROORoots from the seedlings (10 cm shoot stage)2.189163.375021.296643.12205
NODDeveloping tillers at six leaf stage, 3rd internode00.019187700.115688
CAR5Developing grain, bracts removed (5 DPA)000.05956020.0527913
CAR15Developing grain, bracts removed (15 DPA)5.555065.389222.6544412.7116



CDS Structure of MLOC_66583






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66583.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249210.1NoneNoneNoneNone
MLOC_66583.1CUST_18340_PI427708080AvailableAvailablecontig_51793 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g24000.1 -3 4e-81 248 137/166 (83%) 13107.m02367 protein AWPM-19-like membrane family protein, putative, expressed
TAIR PP10 AT1G04560.1 -3 5e-60 194 95/139 (68%) AWPM-19-like family protein | chr1:1245070-1245888 FORWARD LENGTH=186