- Predicted Gene MLOC_66582
MLOC_66582 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.74938 | 6.17107 | 7.27607 | 6.52177 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.510608 | 1.40506 | 2.22034 | 1.01659 |
INF1 | Young developing inflorescences (5mm) | 0.0244466 | 0.0297409 | 0 | 0.0254865 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.29556 | 0.105815 | 0.274946 | 0.249827 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.74835 | 1.97854 | 5.85025 | 3.04424 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0314094 | 0.00804568 | 0.104271 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.71591 | 5.72106 | 4.07133 | 4.51175 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.46429 | 0.283241 | 0.180355 | 0.814092 |
CDS Structure of MLOC_66582
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66582.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g39560.1 |
+1 |
2e-158 |
459 |
264/333 (79%) |
13105.m04171 protein metal cation transporter, putative, expressed |
TAIR PP10 |
AT1G05300.1 |
+1 |
7e-91 |
285 |
152/310 (49%) |
| Symbols: ZIP5 | zinc transporter 5 precursor | chr1:1545258-1547709 REVERSE LENGTH=360 |