MLOC_66582 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.749386.171077.276076.52177
LEAShoots from the seedlings (10 cm shoot stage)0.5106081.405062.220341.01659
INF1Young developing inflorescences (5mm)0.02444660.029740900.0254865
INF2Developing inflorescences (1-1.5 cm)0.295560.1058150.2749460.249827
ROORoots from the seedlings (10 cm shoot stage)7.748351.978545.850253.04424
NODDeveloping tillers at six leaf stage, 3rd internode00.03140940.008045680.104271
CAR5Developing grain, bracts removed (5 DPA)3.715915.721064.071334.51175
CAR15Developing grain, bracts removed (15 DPA)0.464290.2832410.1803550.814092



CDS Structure of MLOC_66582






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66582.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353960NoneNoneNoneNone
MLOC_66582.1CUST_5369_PI427708080AvailableAvailablecontig_51791 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g39560.1 +1 2e-158 459 264/333 (79%) 13105.m04171 protein metal cation transporter, putative, expressed
TAIR PP10 AT1G05300.1 +1 7e-91 285 152/310 (49%) | Symbols: ZIP5 | zinc transporter 5 precursor | chr1:1545258-1547709 REVERSE LENGTH=360