- Predicted Gene MLOC_66580
MLOC_66580 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66580_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_66580_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0.0229364 | 0.317511 | 0.115444 | 0.159738 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0738669 | 0 | 0.236111 | 0.155846 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0299194 | 0 | 0 | 0.0273771 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.33102 | 4.51565 | 3.1176 | 9.99616 |
CDS Structure of MLOC_66580
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66580.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g45110.1 |
+2 |
5e-59 |
199 |
127/214 (59%) |
13108.m04918 protein AP2 domain containing protein, expressed |
TAIR PP10 |
AT1G75490.1 |
+2 |
9e-27 |
108 |
50/73 (68%) |
Integrase-type DNA-binding superfamily protein | chr1:28336045-28336665 FORWARD LENGTH=206 |