MLOC_66577 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8347180.7497720.518520.772105
LEAShoots from the seedlings (10 cm shoot stage)0.8671480.09795160.1347240.326649
INF1Young developing inflorescences (5mm)0.08982720.1753560.05666660.108074
INF2Developing inflorescences (1-1.5 cm)0.06975820.04357740.1164820.089294
ROORoots from the seedlings (10 cm shoot stage)0.4933150.8857410.5384871.0318
NODDeveloping tillers at six leaf stage, 3rd internode14.306915.60565.1049744.2206
CAR5Developing grain, bracts removed (5 DPA)00.02598080.05545780.0665647
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_66577






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66577.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66577.1CUST_14993_PI427708080AvailableAvailablecontig_51772 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g33070.1 +3 1e-119 363 244/422 (58%) 13112.m03374 protein myb-like DNA-binding domain containing protein, putative, expressed
TAIR PP10 AT3G08500.1 +3 1e-63 214 119/209 (57%) | Symbols: MYB83, AtMYB83 | myb domain protein 83 | chr3:2576958-2578072 REVERSE LENGTH=343