MLOC_66548 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.664429.667229.96526.3992
LEAShoots from the seedlings (10 cm shoot stage)30.396228.544233.4722.6227
INF1Young developing inflorescences (5mm)51.900461.798765.329140.0351
INF2Developing inflorescences (1-1.5 cm)53.800561.23154.869751.4167
ROORoots from the seedlings (10 cm shoot stage)22.44733.675426.244230.0067
NODDeveloping tillers at six leaf stage, 3rd internode24.199331.835334.97794.7054
CAR5Developing grain, bracts removed (5 DPA)36.424236.693539.090628.2285
CAR15Developing grain, bracts removed (15 DPA)22.981222.718125.951942.6675



CDS Structure of MLOC_66548






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251104.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251104.1CUST_18949_PI427708080NoneNoneNone
MLOC_17797.1NoneAvailableNonecontig_1578086 (Mapped)
MLOC_27332.1NoneAvailableNonecontig_1823075 (Mapped)
MLOC_29898.1NoneAvailableNonecontig_204773 (Mapped)
MLOC_30057.1NoneAvailableNonecontig_2060671 (Mapped)
MLOC_32270.1NoneAvailableNonecontig_227033 (Not mapped)
MLOC_32287.1NoneAvailableNonecontig_227167 (Mapped)
MLOC_35059.1NoneAvailableNonecontig_2454544 (Mapped)
MLOC_41307.1NoneAvailableNonecontig_2582023 (Not mapped)
MLOC_48366.1NoneAvailableNonecontig_322239 (Not mapped)
MLOC_52104.1NoneAvailableNonecontig_372875 (Not mapped)
MLOC_52810.1NoneAvailableNonecontig_378121 (Mapped)
MLOC_66548.1NoneAvailableAvailablecontig_51741 (Mapped)
MLOC_76557.1NoneAvailableNonecontig_718451 (Not mapped)
MLOC_78514.1NoneAvailableNonecontig_806502 (Not mapped)
MLOC_78671.1NoneAvailableNonecontig_813667 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----