- Predicted Gene MLOC_66513
MLOC_66513 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66513_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_66513_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.75098 | 11.3555 | 8.78756 | 7.98894 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.26059 | 6.23906 | 4.41807 | 5.71851 |
INF1 | Young developing inflorescences (5mm) | 26.6371 | 21.5714 | 20.8326 | 18.2602 |
INF2 | Developing inflorescences (1-1.5 cm) | 25.0867 | 23.5243 | 20.2383 | 24.214 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.80251 | 7.62592 | 5.70905 | 7.98127 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.830063 | 1.01289 | 1.51837 | 3.70736 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.0765 | 10.4844 | 13.4658 | 11.1136 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.9717 | 4.39872 | 4.15721 | 9.58807 |
CDS Structure of MLOC_66513
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66513.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g07050.1 |
-1 |
0.0 |
4283 |
2133/2180 (98%) |
13105.m00763 protein pre-mRNA-processing-splicing factor 8, putative, expressed |
TAIR PP10 |
AT1G80070.1 |
-1 |
0.0 |
4157 |
2063/2173 (95%) |
| Symbols: SUS2, EMB33, EMB177, EMB14 | Pre-mRNA-processing-splicing factor | chr1:30118052-30127574 FORWARD LENGTH=2359 |