MLOC_66513 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.7509811.35558.787567.98894
LEAShoots from the seedlings (10 cm shoot stage)9.260596.239064.418075.71851
INF1Young developing inflorescences (5mm)26.637121.571420.832618.2602
INF2Developing inflorescences (1-1.5 cm)25.086723.524320.238324.214
ROORoots from the seedlings (10 cm shoot stage)2.802517.625925.709057.98127
NODDeveloping tillers at six leaf stage, 3rd internode0.8300631.012891.518373.70736
CAR5Developing grain, bracts removed (5 DPA)13.076510.484413.465811.1136
CAR15Developing grain, bracts removed (15 DPA)4.97174.398724.157219.58807



CDS Structure of MLOC_66513






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66513.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66513.1CUST_14983_PI427708080AvailableAvailablecontig_51682 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g07050.1 -1 0.0 4283 2133/2180 (98%) 13105.m00763 protein pre-mRNA-processing-splicing factor 8, putative, expressed
TAIR PP10 AT1G80070.1 -1 0.0 4157 2063/2173 (95%) | Symbols: SUS2, EMB33, EMB177, EMB14 | Pre-mRNA-processing-splicing factor | chr1:30118052-30127574 FORWARD LENGTH=2359