MLOC_66511 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains648.032567.076553.208669.578
LEAShoots from the seedlings (10 cm shoot stage)320.268149.776165.412196.252
INF1Young developing inflorescences (5mm)83.950279.276976.903975.2184
INF2Developing inflorescences (1-1.5 cm)58.252663.716458.969572.9706
ROORoots from the seedlings (10 cm shoot stage)665.769633.748427.113858.093
NODDeveloping tillers at six leaf stage, 3rd internode1257.971015.26333.3173272.6
CAR5Developing grain, bracts removed (5 DPA)265.155285.162260.359295.617
CAR15Developing grain, bracts removed (15 DPA)45.076547.055944.4033117.855



CDS Structure of MLOC_66511






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66511.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359300NoneNoneNoneNone
MLOC_66511.1CUST_5354_PI427708080AvailableAvailablecontig_51679 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g16980.2 -2 0.0 645 321/350 (92%) 13103.m02025 protein NAD dependent epimerase/dehydratase family domain containing protein, expressed
TAIR PP10 AT2G28760.3 -2 0.0 602 292/323 (90%) | Symbols: UXS6 | UDP-XYL synthase 6 | chr2:12336469-12338642 REVERSE LENGTH=343