MLOC_66506 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.122400.125760.154845
LEAShoots from the seedlings (10 cm shoot stage)00.5495040.1973720.310635
INF1Young developing inflorescences (5mm)0.0713062000.065007
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.540970.12347600.610987
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_66506






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66506.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66506.1CUST_8947_PI427708083AvailableAvailablecontig_51674 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g04350.1 +1 3e-55 183 117/220 (53%) 13111.m00386 protein cell death associated protein, putative, expressed
TAIR PP10 AT1G68620.1 +1 9e-23 95 76/210 (36%) alpha/beta-Hydrolases superfamily protein | chr1:25766018-25767028 FORWARD LENGTH=336