MLOC_66505 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains52.776448.663846.701153.2106
LEAShoots from the seedlings (10 cm shoot stage)36.706420.311422.676124.5568
INF1Young developing inflorescences (5mm)73.94973.332167.343465.2727
INF2Developing inflorescences (1-1.5 cm)55.501162.102557.966870.5639
ROORoots from the seedlings (10 cm shoot stage)38.240742.070436.760155.6948
NODDeveloping tillers at six leaf stage, 3rd internode11.528912.406718.068450.2541
CAR5Developing grain, bracts removed (5 DPA)60.576662.47861.608166.5163
CAR15Developing grain, bracts removed (15 DPA)20.88818.304316.447346.2729



CDS Structure of MLOC_66505






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66505.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355900NoneNoneNoneNone
MLOC_66505.1CUST_5353_PI427708080AvailableAvailablecontig_51674 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g41400.1 +3 0.0 904 453/464 (98%) 13112.m04321 protein eukaryotic translation initiation factor 2 subunit gamma, putative, expressed
TAIR PP10 AT1G04170.1 +3 0.0 843 417/460 (91%) | Symbols: EIF2 GAMMA | eukaryotic translation initiation factor 2 gamma subunit | chr1:1097423-1099702 FORWARD LENGTH=465