MLOC_66503 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.270918.422218.123718.606
LEAShoots from the seedlings (10 cm shoot stage)16.13319.685828.4452610.2434
INF1Young developing inflorescences (5mm)38.996840.963937.182135.8231
INF2Developing inflorescences (1-1.5 cm)42.859948.580246.067853.7748
ROORoots from the seedlings (10 cm shoot stage)18.598719.026418.421124.476
NODDeveloping tillers at six leaf stage, 3rd internode12.295415.144221.246657.5337
CAR5Developing grain, bracts removed (5 DPA)26.374128.744326.172128.5095
CAR15Developing grain, bracts removed (15 DPA)12.00810.470111.26927.9067



CDS Structure of MLOC_66503






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66503.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354510NoneNoneNoneNone
MLOC_66503.2CUST_5351_PI427708080AvailableAvailablecontig_51667 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g35450.1 +2 0.0 848 469/512 (92%) 13110.m03182 protein serine/threonine-protein kinase, putative, expressed
TAIR PP10 AT2G42960.1 +2 0.0 578 327/485 (67%) Protein kinase superfamily protein | chr2:17868597-17870630 REVERSE LENGTH=494