MLOC_66493 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)1.21963001.16491
INF2Developing inflorescences (1-1.5 cm)0.97537601.36771.63711
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)5.296091.216487.498453.32824
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_66493






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66493.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66493.1CUST_8944_PI427708083AvailableAvailablecontig_51642 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g08070.1 +1 5e-20 81 36/49 (73%) 13107.m00796 protein transmembrane BAX inhibitor motif-containing protein, putative, expressed
TAIR PP10 AT3G63310.1 +1 5e-15 66 27/47 (57%) | Symbols: BIL4 | Bax inhibitor-1 family protein | chr3:23387938-23388882 REVERSE LENGTH=239