- Predicted Gene MLOC_66486
MLOC_66486 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 46.1111 | 41.3181 | 44.2337 | 48.7531 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 42.3583 | 46.7356 | 51.6857 | 43.5903 |
| INF1 | Young developing inflorescences (5mm) | 27.1526 | 32.1974 | 35.2008 | 28.9498 |
| INF2 | Developing inflorescences (1-1.5 cm) | 31.1193 | 34.3743 | 34.5917 | 39.9868 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 64.508 | 59.2394 | 52.6435 | 82.2959 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 65.355 | 57.0834 | 68.9782 | 205.667 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 50.6435 | 52.3019 | 49.2299 | 56.113 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 35.7726 | 34.8716 | 31.5972 | 88.7703 |
CDS Structure of MLOC_66486
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66486.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g10290.2 |
+1 |
0.0 |
542 |
280/315 (89%) |
13101.m14996 protein autophagy-related protein 3, putative, expressed |
| TAIR PP10 |
AT5G61500.1 |
+1 |
1e-152 |
441 |
225/319 (71%) |
| Symbols: ATATG3, ATG3 | autophagy 3 (APG3) | chr5:24734216-24736711 REVERSE LENGTH=313 |