MLOC_66485 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.5816.720413.585415.3339
LEAShoots from the seedlings (10 cm shoot stage)3.750.5513940.5716791.24305
INF1Young developing inflorescences (5mm)32.052634.280733.63228.2457
INF2Developing inflorescences (1-1.5 cm)19.494925.651920.545724.1068
ROORoots from the seedlings (10 cm shoot stage)10.63978.564038.811128.15021
NODDeveloping tillers at six leaf stage, 3rd internode0.05994430.05792750.008022260.0973031
CAR5Developing grain, bracts removed (5 DPA)1.391371.552911.28111.33892
CAR15Developing grain, bracts removed (15 DPA)1.913840.7218492.25463.7598



CDS Structure of MLOC_66485






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66485.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376660NoneNoneNoneNone
MLOC_66485.1CUST_18339_PI427708080AvailableAvailablecontig_51624 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g56180.1 +3 0.0 561 275/313 (88%) 13104.m05842 protein peroxidase precursor, putative, expressed
TAIR PP10 AT4G30170.1 +3 1e-109 335 166/315 (53%) Peroxidase family protein | chr4:14762922-14764482 FORWARD LENGTH=325