MLOC_6647 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_6647_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_6647_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.76945 | 2.23771 | 2.44952 | 2.02852 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.18803 | 0.257237 | 0.680746 | 0.519211 |
INF1 | Young developing inflorescences (5mm) | 0.303963 | 1.57359 | 0.512386 | 0.625655 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.440138 | 0.430238 | 0.157672 | 0.375003 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.43035 | 4.37742 | 5.71409 | 4.55948 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.14811 | 6.96398 | 10.2111 | 17.042 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.36622 | 5.70246 | 4.47289 | 4.27065 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.229385 | 0.10317 | 0.245755 | 0.452272 |
CDS Structure of MLOC_6647
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6647.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g61310.1 |
-2 |
6e-76 |
241 |
128/134 (96%) |
13101.m06523 protein DUF640 domain containing protein, putative |
TAIR PP10 |
AT1G07090.1 |
-2 |
8e-69 |
221 |
111/132 (84%) |
| Symbols: LSH6 | Protein of unknown function (DUF640) | chr1:2174202-2174792 REVERSE LENGTH=196 |