- Predicted Gene MLOC_66454
MLOC_66454 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.43988 | 3.09258 | 2.68915 | 3.46149 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.30922 | 1.93507 | 1.96394 | 2.2588 |
| INF1 | Young developing inflorescences (5mm) | 10.1909 | 15.9619 | 14.9065 | 12.5597 |
| INF2 | Developing inflorescences (1-1.5 cm) | 29.9618 | 18.404 | 24.7852 | 27.6516 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 15.7816 | 9.32092 | 15.3148 | 12.4762 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.49371 | 5.18195 | 5.21614 | 14.847 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.25926 | 8.85046 | 8.83543 | 9.2278 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.94821 | 2.66036 | 2.95708 | 7.2904 |
CDS Structure of MLOC_66454
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66454.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g20020.1 |
+1 |
0.0 |
728 |
381/459 (83%) |
13105.m02118 protein polygalacturonase, putative, expressed |
| TAIR PP10 |
AT1G48100.1 |
+1 |
0.0 |
548 |
270/396 (68%) |
Pectin lyase-like superfamily protein | chr1:17766921-17769625 FORWARD LENGTH=475 |