MLOC_66445 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.259621.180219.66822.4927
LEAShoots from the seedlings (10 cm shoot stage)55.013141.794531.527936.1921
INF1Young developing inflorescences (5mm)0.09159630.2123610.05825620.123494
INF2Developing inflorescences (1-1.5 cm)0.1140460.09245840.2385710.162735
ROORoots from the seedlings (10 cm shoot stage)29.260719.351414.355923.9028
NODDeveloping tillers at six leaf stage, 3rd internode91.5902239.3157.2192570.421
CAR5Developing grain, bracts removed (5 DPA)0.2171060.2811960.09669240.222786
CAR15Developing grain, bracts removed (15 DPA)0.01464430.067011800.142815



CDS Structure of MLOC_66445






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66445.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372051NoneNoneNoneNone
MLOC_66445.1CUST_5340_PI427708080AvailableAvailablecontig_51565 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g01590.1 -2 0.0 995 500/677 (74%) 13102.m00080 protein glycosyl hydrolases, putative, expressed
TAIR PP10 AT1G62660.1 -2 0.0 652 329/593 (55%) Glycosyl hydrolases family 32 protein | chr1:23199949-23203515 FORWARD LENGTH=648