MLOC_66440 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1056770.2300350.251660.178899
LEAShoots from the seedlings (10 cm shoot stage)0.06095560.052276900.0315123
INF1Young developing inflorescences (5mm)0.3048240.4039320.5200890.388749
INF2Developing inflorescences (1-1.5 cm)0.09016170.06568780.0776540.106757
ROORoots from the seedlings (10 cm shoot stage)0.4780750.3294670.3704280.397146
NODDeveloping tillers at six leaf stage, 3rd internode000.01490190.0403232
CAR5Developing grain, bracts removed (5 DPA)0.2071140.2545390.23240.255471
CAR15Developing grain, bracts removed (15 DPA)0.1009190.08797420.1490290.286141



CDS Structure of MLOC_66440






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66440.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373530NoneNoneNoneNone
MLOC_66440.1CUST_7011_PI427708080AvailableAvailablecontig_51560 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g23760.1 +3 1e-29 121 91/188 (48%) 13101.m02516 protein OsMADS93 - MADS-box family gene with M-beta type-box
TAIR PP10None-----