MLOC_66418 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)1.284630.9398961.273820.600165
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode2.922513.563676.0419110.6216
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.09688580.3912810.5099680.13718



CDS Structure of MLOC_66418






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66418.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376522NoneNoneNoneNone
MLOC_66418.1CUST_5335_PI427708080AvailableAvailablecontig_51530 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g01180.1 -1 2e-23 94 47/71 (66%) 13101.m00030 protein expressed protein
TAIR PP10 AT5G63500.1 -1 4e-15 70 35/69 (51%) Protein of unknown function (DUF 3339) | chr5:25423460-25423669 FORWARD LENGTH=69