MLOC_66400 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.084036.782796.91186.39264
LEAShoots from the seedlings (10 cm shoot stage)6.163084.156486.635294.73656
INF1Young developing inflorescences (5mm)7.653766.793668.26885.86188
INF2Developing inflorescences (1-1.5 cm)7.058568.127848.099677.89334
ROORoots from the seedlings (10 cm shoot stage)4.765374.050255.653225.11712
NODDeveloping tillers at six leaf stage, 3rd internode7.11066.970037.7305123.3612
CAR5Developing grain, bracts removed (5 DPA)4.199784.66045.007694.14326
CAR15Developing grain, bracts removed (15 DPA)1.736731.383482.05513.64476



CDS Structure of MLOC_66400






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66400.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66400.1CUST_12987_PI427708083AvailableAvailablecontig_51502 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g23504.2 -2 1e-79 254 131/164 (80%) 13106.m10541 protein DTW domain containing protein, putative, expressed
TAIR PP10 AT1G03687.1 -2 2e-43 157 87/160 (54%) DTW domain-containing protein | chr1:918308-920306 FORWARD LENGTH=381