MLOC_66399 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.430054.80085.548064.16026
LEAShoots from the seedlings (10 cm shoot stage)1.809180.8859261.0790.920397
INF1Young developing inflorescences (5mm)0.4748830.5458110.5241750.36432
INF2Developing inflorescences (1-1.5 cm)0.9029850.985751.283570.915937
ROORoots from the seedlings (10 cm shoot stage)3.045733.013162.354433.27137
NODDeveloping tillers at six leaf stage, 3rd internode1.696172.115480.2911295.32355
CAR5Developing grain, bracts removed (5 DPA)0.3078620.4077860.2552030.242291
CAR15Developing grain, bracts removed (15 DPA)0.254670.2836140.4719370.509887



CDS Structure of MLOC_66399






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66399.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66399.1CUST_14967_PI427708080AvailableAvailablecontig_51502 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g37110.1 -2 5e-92 298 200/272 (74%) 13101.m03766 protein ABIL2, putative, expressed
TAIR PP10 AT3G49290.2 -2 6e-42 157 76/127 (60%) | Symbols: ABIL2 | ABL interactor-like protein 2 | chr3:18273407-18275221 FORWARD LENGTH=312