- Predicted Gene MLOC_66396
MLOC_66396 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.52692 | 1.87725 | 1.827 | 2.02651 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.35889 | 3.02139 | 2.75476 | 2.48938 |
| INF1 | Young developing inflorescences (5mm) | 2.44732 | 2.51062 | 2.79586 | 2.28372 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.23743 | 3.82617 | 4.51497 | 4.70147 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.11388 | 2.66951 | 2.96514 | 3.49245 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.61488 | 2.04992 | 2.30678 | 7.02716 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.12922 | 2.88974 | 2.68021 | 2.96231 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.41852 | 1.83763 | 1.68815 | 4.93346 |
CDS Structure of MLOC_66396
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66396.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g23530.1 |
+1 |
0.0 |
1579 |
834/1079 (77%) |
13106.m02528 protein pre-mRNA-splicing factor ATP-dependent RNA helicase, putative, expressed |
| TAIR PP10 |
AT3G26560.1 |
+1 |
0.0 |
1391 |
711/956 (74%) |
ATP-dependent RNA helicase, putative | chr3:9750122-9753719 REVERSE LENGTH=1168 |