MLOC_66376 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.489359.953339.8402810.5992
LEAShoots from the seedlings (10 cm shoot stage)10.59922.668442.612444.83538
INF1Young developing inflorescences (5mm)57.460650.444644.675746.5652
INF2Developing inflorescences (1-1.5 cm)35.018844.894538.124949.6035
ROORoots from the seedlings (10 cm shoot stage)3.272756.731688.280919.07348
NODDeveloping tillers at six leaf stage, 3rd internode4.629675.245993.4551817.7048
CAR5Developing grain, bracts removed (5 DPA)10.610511.430911.315112.5945
CAR15Developing grain, bracts removed (15 DPA)3.526413.65362.899588.93887



CDS Structure of MLOC_66376






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66376.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66376.2CUST_14964_PI427708080AvailableAvailablecontig_51477 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g50320.1 -3 0.0 799 529/600 (88%) 13102.m05710 protein ATMAP70 protein, putative, expressed
TAIR PP10 AT1G24764.1 -3 0.0 656 434/571 (76%) | Symbols: ATMAP70-2, MAP70-2 | microtubule-associated proteins 70-2 | chr1:8760001-8763256 REVERSE LENGTH=634