- Predicted Gene MLOC_66373
MLOC_66373 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66373_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_66373_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.115472 | 0.325068 | 0.259113 | 0.280211 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.153224 | 0.263502 | 0.523214 | 0.260708 |
INF1 | Young developing inflorescences (5mm) | 0.157406 | 0.0895215 | 0.299905 | 0.169992 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.775697 | 0.600283 | 0.143481 | 0.634913 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.101192 | 0.145664 | 0.11578 | 0.398109 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.329224 | 0.535144 | 0.659017 | 0.536578 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.285568 | 0.204586 | 0.157219 | 0.586324 |
CDS Structure of MLOC_66373
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66373.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g64650.2 |
+3 |
3e-17 |
78 |
43/64 (67%) |
13101.m06962 protein VAMP-like protein YKT62, putative, expressed |
TAIR PP10 |
AT5G58060.1 |
+3 |
4e-11 |
62 |
29/54 (54%) |
| Symbols: YKT61, ATYKT61, ATGP1 | SNARE-like superfamily protein | chr5:23498277-23500128 FORWARD LENGTH=199 |