MLOC_66368 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9999870.7905951.071760.883554
LEAShoots from the seedlings (10 cm shoot stage)2.107413.311434.04612.39258
INF1Young developing inflorescences (5mm)0.0562393000.0506418
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)3.629324.862194.56684.81739
NODDeveloping tillers at six leaf stage, 3rd internode0.3051120.2014520.4641390.664108
CAR5Developing grain, bracts removed (5 DPA)0.1097530.2787640.2070460.210279
CAR15Developing grain, bracts removed (15 DPA)0.1985480.3859950.2844880.774422



CDS Structure of MLOC_66368






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66368.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66368.2CUST_14962_PI427708080AvailableAvailablecontig_51470 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g02760.1 -2 2e-77 245 142/255 (56%) 13112.m00221 protein DUF567 domain containing protein, putative, expressed
TAIR PP10 AT2G38640.1 -2 7e-19 86 68/218 (31%) Protein of unknown function (DUF567) | chr2:16157725-16158474 REVERSE LENGTH=196