MLOC_66367 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.525915.394615.478716.8801
LEAShoots from the seedlings (10 cm shoot stage)23.623919.087127.442818.8996
INF1Young developing inflorescences (5mm)22.31825.941524.872720.275
INF2Developing inflorescences (1-1.5 cm)17.670519.0419.437719.898
ROORoots from the seedlings (10 cm shoot stage)12.561717.707916.439319.0101
NODDeveloping tillers at six leaf stage, 3rd internode15.52918.102319.864352.419
CAR5Developing grain, bracts removed (5 DPA)16.364721.135919.758218.3941
CAR15Developing grain, bracts removed (15 DPA)4.464394.419455.5736410.4308



CDS Structure of MLOC_66367






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66367.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369413NoneNoneNoneNone
MLOC_66367.4CUST_5324_PI427708080AvailableAvailablecontig_51470 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g02730.1 +1 6e-82 248 139/158 (88%) 13112.m00216 protein histidine triad family protein, putative
TAIR PP10 AT5G58240.2 +1 2e-69 214 113/153 (74%) | Symbols: FHIT | FRAGILE HISTIDINE TRIAD | chr5:23558349-23559171 REVERSE LENGTH=160